rs36895050 SNP Detail

Summary

• ID
  rs36895050
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:8380255 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCCAGAAAG ACCCTTCTGC
  TTTTTGAATC ACTATCATTA AATGACTGAT CTCTGTGAAA GTGTGGTTTT AAGATTACAA
  GGGGCCTTAG AGAGTAGCGA CTCTACAGAA AAGAGACTGC CCTCTGGGGT GCCATTAAAT
  ATTACCAACA GAGTATTCTG GAATCCTTAA ACTGCACTCT TCTTCCTTCT TCTCCTGGCC
  W
  CAGGAACACA TTCTCAGAAA TTCTGACAGT CAGCCTCATG CTAGAGGCAG AGGTCTAAGG
  AACACCATGG ATGTAATCGA ACCTCTAGCT TTAGAGACAA AGACTGTCAA AGCTGGGAAA
  GCGCACACCA TCACCACACC TGTTACTCCC TCTCCAGACT GTGACCCAGG ACCGCTCCAC
  AGAGCTGCAC CACATTGCCT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50812314	NES14197237	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	T	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36895050					SNP	A	A	A	A	A	A	A	A	A	A	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50812314	NES14197237	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:8380255 () rs orientation: forward

Symbol	Name	Function Class
D10Mit76	DNA segment, Chr 10, Massachusetts Institute of Technology 76	665 bp distal
Rr229094	regulatory region 229094	147 bp proximal
Ust	uronyl-2-sulfotransferase	within coordinates