rs36897403 SNP Detail

Summary

• ID
  rs36897403
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:32668582 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAATTTGAG TGTGTATATG
  GTCACATGTG TGTATATGTG TTCAAGAACA GATGTTAGTA TAGAGGCCAG AGGCTGACAG
  CATGTGCCTT CCTAGACTGA CCTTCATCTT ATATACTATG CTAGCAAGCT TTACCCAGGG
  TCCCCCTATC TTTACTTTCC CAAGGTACTT GGAATTCTAA CTCTGATCCT CACACCTGTA
  S
  TACAAGTGCC TTATACAGTG AGCTGTCTCT GCAACCTTGA GCTCACTCTT TAGATAGGTT
  TCTCTATCTG CTGGATGACG AAACGAAGGA AACCTGCAAA ATCCAGGGTT CTCAGTAAGG
  TCTGGAGCCA GTGATTACAA GCATGAACTG TTGGTTCAAG AGAAAAGCAT CAGAAATCAG
  TTCCATGAAT TGCACCTTAA                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51264473	NES13790689	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36897403					SNP	C	C	C	C	C	C	G	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51264473	NES13790689	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:32668582 () rs orientation: forward

Symbol	Name	Function Class
Rr379152	regulatory region 379152	31 bp downstream