rs36904204 SNP Detail

Summary

• ID
  rs36904204
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:61011093 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCCCTTGGGA GCCATTTGTG
  AACTTGCATA GACAGCTGCC TTTGTACCCT GTATCTTAGG AACAGGTCAA CCCATGTCTT
  TGGCAAGTCT TTTGTGAGCG GTTCCAACTG TGTTCAGAGG TGGGAGGTAA CGGCGCTGTC
  TATGTAAGCT ACGTGTTTCA ATGTGGGGAC AGCAGGCATG ACTTCAGGGA GCCAGAGGGA
  R
  CATCCTGGAT TGAGTTGGAA CACTTTCAGG GATGCATTGA TGTTGCAAAG ATGCATTAGA
  GGCAGAGCTC ATCTCCTCTG CAAATGGAGA GTCCACCTGC CTCCATGCCA ACCTCTGGAG
  TCCTCAGCAT CTTCCACAGC CTCTGATTAC GTGCCACTTT TGTCTCTAAC CCCCAAAGTG
  ACAACTATAT AGCCTAATGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss52025091	NES15041403	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs36904204					SNP	A	A	A	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52025091	NES15041403	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:61011093 () rs orientation: forward

Symbol	Name	Function Class
4933433G08Rik	RIKEN cDNA 4933433G08 gene	within coordinates
Gm34004	predicted gene, 34004	within coordinates
Rr196206	regulatory region 196206	1893 bp distal
Rr201070	regulatory region 201070	1708 bp proximal
Tssr90004	transcription start site region 90004	1569 bp downstream