rs36906104 SNP Detail

Summary

• ID
  rs36906104
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:61010977 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGACACTGC CTTGTCACAG
  TGTTGAGAGT GTGATGTCCT GCCATCTCCC TCCATGTTGT AAATGTGTGT CATGTTCAAC
  CACCAGTCAG ATGTAGGGCC CTAAGTCCAG CCAAGACCCC TTGGGAGCCA TTTGTGAACT
  TGCATAGACA GCTGCCTTTG TACCCTGTAT CTTAGGAACA GGTCAACCCA TGTCTTTGGC
  R
  AGTCTTTTGT GAGCGGTTCC AACTGTGTTC AGAGGTGGGA GGTAACGGCG CTGTCTATGT
  AAGCTACGTG TTTCAATGTG GGGACAGCAG GCATGACTTC AGGGAGCCAG AGGGAACATC
  CTGGATTGAG TTGGAACACT TTCAGGGATG CATTGATGTT GCAAAGATGC ATTAGAGGCA
  GAGCTCATCT CCTCTGCAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	SM/J	WSB/EiJ
ss52025092	NES15041402	PERLEGEN	MM_PANEL2	f	SNP	A	A	G		G		A
ss322978188	CHEV_9_60951502	CHEVERUD	SCREENING_POP	f	SNP				A		G
SNP Consensus Information
SNP					Consensus Type	A/J	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	SM/J	WSB/EiJ
rs36906104					SNP	A	A	G	A	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52025092	NES15041402	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:61010977 () rs orientation: forward

Symbol	Name	Function Class
4933433G08Rik	RIKEN cDNA 4933433G08 gene	within coordinates
Gm34004	predicted gene, 34004	within coordinates
Rr196206	regulatory region 196206	1777 bp distal
Rr201070	regulatory region 201070	1824 bp proximal
Tssr90004	transcription start site region 90004	1685 bp downstream