rs36911319 SNP Detail

Summary

• ID
  rs36911319
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:10184309 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATTGGTAT TTGGGGGTTT
  GGTTTGGTCT TGTTTTGAGA CAGGGTCTCA CTGTGCAGAC ATGGCTGATG TCAAACTCAT
  GGGGTCCATC TGCCTCTGGA GAGTGCTGGG ATCACAGGAA TATACAACTC CACCCGGCAG
  AAAGGTGAAG TGCTCATGTC CCAGCTGTAC TAGGAGCCAT ACATGACTAG AGGCTAGAGG
  Y
  GATTGGCCTA AGTACTGTGG GCTGCTTTTC CTCGTGGATG TCAGAGATAC GGTGTGGAGC
  ACCAGAGTCC ATGCCATTTC TTGGTCCCCT CTGCCTGGCT GCATCAAGCT AGACAAGCCT
  CCCAGGAATC CCTTAGCCTG TTCTTCCCCA TGAAAGGTAG TCAGAGACAG CTCCTGCACT
  GTAGCCCATC TTTGCTTCTC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50603758	NES13643205	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36911319					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50603758	NES13643205	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:10184309 () rs orientation: forward

Symbol	Name	Function Class
Myrf	myelin regulatory factor	1327 bp downstream
Rr356596	regulatory region 356596	309 bp distal
Rr361277	regulatory region 361277	536 bp proximal
Rr362959	regulatory region 362959	1508 bp distal
Rr363809	regulatory region 363809	1892 bp proximal
Tmem258	transmembrane protein 258	within coordinates
Tssr155040	transcription start site region 155040	466 bp downstream