rs3691423 SNP Detail

Summary

• ID
  rs3691423
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:32115446 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAAGCAGAAA AATAAGAGAA
  TCCCATAAAA TTAAAATAAC TGCTTTAAAT TTACTGTCTT AAAAGGAAAA AAAAATTCTG
  GCATGTGCTT AAAGATGTTA TATTAAGTTG AACAAGCCAA TCCTAAGAAA ATAACACTGT
  TTGGGTCTGC AAACACAAGG CAAATAAAAC CATCAAAATT TGTAGAAACA GAAAGAAGGG
  Y
  GGGTTGACAG GGGCTGGGGA CATCAGAAGG CAGCCTTCTT GTTTTAGTGG GCAAAAAGCT
  TCAGTTTTGT AAGAAGAAAG GGTTTTGGAA TTGGTTGTAT AACAATGTGA ATATATTTAA
  CTGCTGGATT GTATTCTTAA AATGGATAAA GCAGCAATTC TGTACTATGT TTACTTTTCT
  AGTGAATTCA AAAATATATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
ss5067547	WI_WGS_12_26168487	WI	MOUSE	f	SNP	T			C
ss39002929	mCV22596083	ABI	CRAMUS_MOUSE	f	SNP		T	T	C	C
ss137572542	ENSMUSSNP5653525	ENSEMBL	ENSEMBL_Sanger	f	SNP		T	T		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J
rs3691423					SNP	T	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:32115446 () rs orientation: forward

Symbol	Name	Function Class
Gm51992	predicted gene, 51992	within coordinates
Gm60244	predicted gene, 60244	within coordinates