rs36919457 SNP Detail

Summary

• ID
  rs36919457
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:118105842 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGGGGGCTC TCTGGTAGGA
  GTGAGGTCGA TGCCCGTGAC TGCCCGTGAC TGCATCTAGA TGATGTGGTC TTGTCAGCCT
  CAGACTATAT ACTGAGGACA CTGGGGAGCC ATAGAAAGCT CTTAAGGGAC AGAGGGGATC
  CTAGACAACA GATCAGGGGC TAAGGGGCAG AAGGCTGGAC ATGTGGGAAA TAGCCAGGGA
  R
  CCCTGTTTTC TCTGTTGATG GTGATCACCA CGTATTAGCA GAACGGCCTT TTGTTTCCAG
  GGCTAGAGCA TCACCACCCC CACCATCCCC ACCCCTGGTC AGAGGAGTAA GACACACTGG
  CCAGCTCTGG GCATGTCCCT TTAACCTGGC CATGGCCCTT GGCTGGTGGT AGTGATGACT
  CTCCCAGGCT GCAGTGGGCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51982061	NES14997516	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36919457					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51982061	NES14997516	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:118105842 () rs orientation: forward

Symbol	Name	Function Class
Cmip	c-Maf inducing protein	within coordinates
Rr670847	regulatory region 670847	24 bp proximal
Rr670848	regulatory region 670848	1583 bp proximal
Tssr79606	transcription start site region 79606	245 bp upstream
Tssr79607	transcription start site region 79607	286 bp upstream