rs36922585 SNP Detail

Summary

• ID
  rs36922585
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:119183627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGATGGCTC AGTGGTTATG
  AGCACTGACT GCCCTTCCAG AGGTCCTGAG TTCACATCCC ACCACATGGT GGCTCACAAT
  CTGTAATGGG ATCTGATGCC CTCTTCTGCT GTGTGTAAGG AGAATGACAA TGTACTCATA
  TACATAACAT AAATAGATCT TTTAAAAATT CCTTAAAGAA ATAGACTGAA TATAGATTTA
  R
  TTTCCAGTAT ACCGCCAAGA TGAATCTTCT GCATATAAAC ATATTATAAA ATTACAGATA
  CATAAAACAA ATTATTGAGT CTGAATTATA ATTGCCTTAT CTAGTTCAGT CCCTAATTTC
  TGGTGGTTTC TTTGTTTTGC TTTTTGTGTC ACAATACTGG GATTTATAGC CTTGTCCCTG
  CTAGGCAAGT GCTCTATGGC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss50800729	NES14205168	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A		G	A	A		A
ss323218994	CHEV_9_119263679	CHEVERUD	SCREENING_POP	f	SNP											G				A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs36922585					SNP	A	A	A	A	A	A	A	A	A	A	G	G	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50800729	NES14205168	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119183627 () rs orientation: forward

Symbol	Name	Function Class
Rr688472	regulatory region 688472	1315 bp proximal