rs36924615 SNP Detail

Summary

• ID
  rs36924615
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:58662813 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGTTTACATT TTCAATGCTA
  TCCCAAAGGT CCCCCATACC CACCCCCCCA ATCCCCTACC CACCCACTCC CCCTTTTTGG
  CCCTGGCGTT CCCCTGTACT GGGGCATATT TTTATTTAAT TTTAGTTCTG GACATAGAGC
  CTGAGGCTGC TCATACTAAG CAAGTGCTCT ATTGCAGAGA CGCAGCGCCA ACCAGGGATA
  K
  GTCTCAATTT TCCCTTGGTT ATCGATTTGA TATGCCGATA TCAGCCACAT GTTTACACTT
  TTGTTTCATT CATTTTTAGT GTGTTGTGGG AGCACAATGC TCATGTGGGT ATGCAAGTGT
  ATGGAGTCTT CCTGGATTGC TATACATTCT ATTTTTTTTG AAGCACCATC TTTCTGAGTT
  CCAAGGACCT GCCTGTCTCT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MOLF/EiJ	PWD/PhJ
ss50904025	NES13492697	PERLEGEN	MM_PANEL2	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	MOLF/EiJ	PWD/PhJ
rs36924615					SNP	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50904025	NES13492697	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:58662813 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11111	CpG island 11111	1586 bp proximal
Pnlip	pancreatic lipase	within coordinates
Rr361109	regulatory region 361109	188 bp proximal
Tssr5571	transcription start site region 5571	1254 bp downstream
Tssr157266	transcription start site region 157266	1296 bp downstream
Tssr157267	transcription start site region 157267	1277 bp downstream
Tssr157268	transcription start site region 157268	1223 bp downstream
Tssr157269	transcription start site region 157269	630 bp downstream
Tssr157270	transcription start site region 157270	556 bp downstream
Tssr157271	transcription start site region 157271	675 bp upstream
Tssr157272	transcription start site region 157272	686 bp upstream
Tssr157273	transcription start site region 157273	1817 bp upstream
Tssr157274	transcription start site region 157274	1849 bp upstream
Tssr157275	transcription start site region 157275	1869 bp upstream
Tssr157276	transcription start site region 157276	1892 bp upstream
Tssr159959	transcription start site region 159959	1244 bp upstream
Tssr159960	transcription start site region 159960	1196 bp upstream
Tssr159961	transcription start site region 159961	767 bp downstream