rs36927064 SNP Detail

Summary

• ID
  rs36927064
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16346722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGAGAGATGT ATAGGACAGG
  GGTGTCCTCA ATGGAGAACT TGTTGGTGGT GGGTGGGAAA CCCTGAGAAG CAGGTGTGAT
  GTGAGTTAAG TATTAGAAAG GGAGCCTGAC AGGGTTGAGG AAAAAGGCAG AAAGCCACGA
  GGGAGAAAGG CAAGAAGCAA AAGAGGAAAG GAACTGAGAA ACGGGTATCA AAAGAAAATG
  M
  ACATCTAAAC AAGAATTTGT AGACTCCAAG AAAGGGGAGA CGGGGATAAT AAGAAAGGAA
  TGATACCTTC AGGTTAGAAC TAAGGAAAAG GACTTAAAAG GAGGTGGAGG CAGAACAAGA
  CAGGATCGGA GAATGAACAA AAAAAAAATC CAGTGAAAGG CTGAATGGGG GGGATGGAGG
  ACTTAGAATT AAGAAGGACC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51470074	NES13979795	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36927064					SNP	A	A	A	A	A	A	C	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51470074	NES13979795	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16346722 () rs orientation: forward

Symbol	Name	Function Class
Arhgap35	Rho GTPase activating protein 35	within coordinates
Cpgi18383	CpG island 18383	1019 bp proximal
Gm29443	predicted gene 29443	1027 bp upstream
Rr642704	regulatory region 642704	1870 bp distal
Rr642705	regulatory region 642705	951 bp distal
Rr642706	regulatory region 642706	540 bp proximal
Rr642707	regulatory region 642707	1038 bp proximal
Tssr70753	transcription start site region 70753	1751 bp downstream
Tssr70754	transcription start site region 70754	1816 bp downstream
Tssr70755	transcription start site region 70755	1873 bp downstream
Tssr70756	transcription start site region 70756	1981 bp downstream
Tssr70757	transcription start site region 70757	1995 bp downstream