rs36927577 SNP Detail

Summary

• ID
  rs36927577
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:14015504 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAAGCTTA TCTTAAGCCT
  CAGTCTGGTT TATGTCCCAT TACTATTGCT ATCCCTCAGG GTGTCTCAGG TACTATGCTC
  AGGTACTCCA GTACCAATTC CACCTTGTTT GAAGTAGGTC ATAAGGCTGG GTCAGCAGGC
  CCCTAAGACC TGCATCTTTA ATTCCATGAG ACAGAGGGTT CATTAGATAC CTTTCCTCCC
  R
  GAGCAGCAAG AGGGCTAGAC TCTGTCCCCA CTAACCACAT TAGATACCTT TCCTCCCGGA
  GCAGCAAGAG GGCTAGACTC TGTCCCCACT AACCATCGGC TGTGGCCTCA AGACAAGGAA
  CCGTGAGTTA AAGGTGACAC ACAGGTCATG CAGAGACGAC TCCCTAGTAT TCTGCTCCAG
  TCCCAGGAAG CTCTAAGTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	WSB/EiJ
ss51988191	NES14998701	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	FVB/NJ	MOLF/EiJ	WSB/EiJ
rs36927577					SNP	A	A	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51988191	NES14998701	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:14015504 () rs orientation: forward

Symbol	Name	Function Class
1700019J19Rik	RIKEN cDNA 1700019J19 gene	within coordinates
Rr199406	regulatory region 199406	within coordinates