rs36928470 SNP Detail

Summary

• ID
  rs36928470
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr5:32573700 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ATGTAATATT TAGGACAACT CTAAAACAAA GACCCCATTC
  CCATCTTATA GATTAAAACA ACAACAAAGA CAAACAAACA AACCTTTAAA GTACAGAGCT
  R
  AGATGGTAGA TTAAAATTCA GTCTGGCTGC CTTGAATCAA TCAATCTATC TATCTATCTA
  TCTATCTATC TATCTATCTA TCTATCTATC TTATTGTTTT                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51692627	NES14756037	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	G	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36928470					SNP	G	A	G	G	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51692627	NES14756037	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:32573700 () rs orientation: forward

Symbol	Name	Function Class
D5Mit334	DNA segment, Chr 5, Massachusetts Institute of Technology 334	1322 bp proximal
Rr609357	regulatory region 609357	1407 bp distal
Rr609358	regulatory region 609358	276 bp proximal