rs3693235 SNP Detail

Summary

• ID
  rs3693235
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:116332655 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCCGTGATCC TTGCAGAAAG AACCTGCCTC ATTTATGCCT
  CCTGTCCTTT TAGGGGCTTA TACAAGCCCA GAAATCTTTC TACATCAGTC TCTCCAGCTC
  M
  CATATGGTAA GTATTTCTAG GTAGAAGTCG AAAGCCTGTT AAAAGGAGCC AGGGCCCAGT
  AGAATGACAG ACTCCTGCTC TTGTGGCCTA TTCTTGGTC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129X1/SvJ	A/J	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5069369	WI_WGS_11_117340895	WI	MOUSE	f	SNP			A	C
ss132886603	ENSMUSSNP3055091	ENSEMBL	ENSEMBL_Sanger	f	SNP	A	A			A
ss323865679	CHEV_11_116303143	CHEVERUD	SCREENING_POP	f	SNP						A	C
SNP Consensus Information
SNP					Consensus Type	129X1/SvJ	A/J	BALB/cByJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3693235					SNP	A	A	A	C	A	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:116332655 () rs orientation: forward

Symbol	Name	Function Class
Qrich2	glutamine rich 2	within coordinates
Rr460289	regulatory region 460289	891 bp distal