rs36934233 SNP Detail

Summary

• ID
  rs36934233
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:90885627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CAGGA AGATGTTTTC TGGGGCTTTC
  Y
  TCCCTGCTCA AGGACCTGAG TTTCT                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NOD/ShiLtJ	SM/J
ss51301128	NES14511545	PERLEGEN	MM_PANEL2	f	SNP		T	T	C	T		C	T
ss144935016	ENSMUSSNP4534807	ENSEMBL	ENSEMBL_Sanger	f	SNP	C				T
ss319838449	CHEV_1_92854482	CHEVERUD	SCREENING_POP	f	SNP						C			T
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	LG/J	MOLF/EiJ	NOD/ShiLtJ	SM/J
rs36934233					SNP	C	T	T	C	T	C	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51301128	NES14511545	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:90885627 () rs orientation: forward

Symbol	Name	Function Class
Rab17	RAB17, member RAS oncogene family	228 bp downstream
Rr415504	regulatory region 415504	756 bp distal
Rr415505	regulatory region 415505	1002 bp distal
Rr415506	regulatory region 415506	855 bp distal