rs36934505 SNP Detail

Summary

• ID
  rs36934505
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:127758853 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGGTCAAT ATACAGTGGT
  TCAGGGCCCC GGGACTGGCC TCGCCTGGGT GAAAGACTGG TTCCTGATTA ATCACCTCAG
  GTTAAGAGCA GATAGAATCT CCAAAATGAC ATTATCTACC ACTTAGAGCG TGTGGTAAGA
  GAATTTCCCA GAAAGACAGA CAGGGATGCA AATGGTGTTT CCGGCCCACA GTGTAAAACA
  Y
  GGGGTTCCCA AGATGCCTGT TACAGCACCA AAACAACCAA TGGTAACATT TATGACAATC
  GTCTTTTCTT TCACTTGAAA ATAGAAAAAA AATCTCTATG AATCTGCCAG AGGGCCTGAT
  GTCTTGTGTC TTTTCTCTCT GCCGTCCCGT GGTCTAAGAT GGCACCAGCC AGCCCGAATG
  AGAAGATGGA GGGTAGGTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50945503	NES14147396	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36934505					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50945503	NES14147396	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:127758853 () rs orientation: forward

Symbol	Name	Function Class
Gm15905	predicted gene 15905	1618 bp downstream
Gm40804	predicted gene, 40804	within coordinates