rs36936117 SNP Detail

Summary

• ID
  rs36936117
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:58670437 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTTGGGTTTG GGAATATTGC TTAAATGATA AAGCTATCAT
  GTCCTTTGTA AATATTATTA ATGCTTCTGA TCACCTAAGA GAGCGCTCAA GGCTCTTGGT
  R
  ATGCTGTGGT GAGAGTGCTA GAATTGGCCA CTTCTGTTAT CTCTCTGGTC AGACATCTCT
  GGAGGGATTG AACGGCAGGA GACAAGGAGG GACTCTGAGA                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	MOLF/EiJ	PWD/PhJ
ss50903969	NES13492604	PERLEGEN	MM_PANEL2	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	MOLF/EiJ	PWD/PhJ
rs36936117					SNP	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50903969	NES13492604	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:58670437 () rs orientation: forward

Symbol	Name	Function Class
Pnlip	pancreatic lipase	206 bp downstream
Tssr157284	transcription start site region 157284	1948 bp downstream
Tssr157285	transcription start site region 157285	1243 bp downstream
Tssr157286	transcription start site region 157286	1196 bp downstream
Tssr157287	transcription start site region 157287	1168 bp downstream
Tssr157288	transcription start site region 157288	248 bp downstream
Tssr159962	transcription start site region 159962	219 bp upstream