rs36940026 SNP Detail

Summary

• ID
  rs36940026
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:24513076 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TTAATTTTGA TTTGCGGTGT TTTTATTCAT TTGCAAGTTT
  TTCAATTAAT GTTAAAAGAG TACTGTTAAT TAAGTTAATA TAGTTTTTAA GAACACAGAA
  W
  ATGCTTAAAA GGAAAAAAAA TTAAGCCAGT AGAACAGAAA GGGAGAAAAT AAACAGTGAA
  ATAAACCTCT ATTGTTAATA CTCTAGTTTT ACTTCTTAGA                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
ss51254451	NES13801396	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	T
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
rs36940026					SNP	A	A	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51254451	NES13801396	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:24513076 () rs orientation: forward

Symbol	Name	Function Class
Gm67852	predicted gene, 67852	1478 bp upstream
Iqub	IQ motif and ubiquitin domain containing	within coordinates
Rr627228	regulatory region 627228	1552 bp proximal
Rr627229	regulatory region 627229	1980 bp proximal
Tssr59986	transcription start site region 59986	1959 bp downstream