rs3694076 SNP Detail

Summary

• ID
  rs3694076
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:18912624 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GGGAT GAACAGGACT GGACCTTTTG
  R
  GCTTGAAAAG TCTTGGATAC AGCGA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5070219	WI_WGS_7_14219610	WI	MOUSE	f	SNP		G	A
ss46074359	mCV25048399	ABI	CRAMUS_MOUSE	f	SNP	G		A	G
ss148469620	ENSMUSSNP3284027	ENSEMBL	ENSEMBL_Sanger	f	SNP	G			G
ss322116610	CHEV_7_19764048	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3694076					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:18912624 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18450	CpG island 18450	1889 bp distal
Cpgi18451	CpG island 18451	405 bp distal
Cpgi18452	CpG island 18452	258 bp proximal
Eml2	echinoderm microtubule associated protein like 2	within coordinates
Rr155272	regulatory region 155272	within coordinates
Rr167138	regulatory region 167138	within coordinates
Tssr64795	transcription start site region 64795	460 bp downstream
Tssr64796	transcription start site region 64796	282 bp upstream