rs3694206 SNP Detail

Summary

• ID
  rs3694206
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  107
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  ChrX:51238313 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGGAGCAAAT AAAAACCAGC ACAGCTATCT ATGCACACTC
  ATAGCCCCAG TACTGGGGGA AGGGAAGAAA CAAGCAATTC TCTGGCTTCC ACATGTATGC
  R
  acatacacac acacacacac acacacacac acacacacgc acacCACAAA ATAACGAAAA
  AAAACAAAGA GATATTGTTA AAATTAACAC AGTGCTTCTG                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J
ss5070351	WI_WGS_X_37753839	WI	MOUSE	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J
rs3694206					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: ChrX:51238313 () rs orientation: forward

Symbol	Name	Function Class
Gpc4	glypican 4	Intron
Rr691243	regulatory region 691243	1698 bp proximal