rs36947369 SNP Detail

Summary

• ID
  rs36947369
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:71224913 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCACAACAC ATAGGCTGTA
  GGCATGCATA ATAATGAAAG CCTTATGATA TATATTGCAG ATACAATATA TATTTTCAAA
  AGGAGAAATA AGGGGAGATG TAATAAACAA TAATATTGTG TTCTAATATT TATTTTTACT
  GTATTATTGA AAAATGTCCA GTTATAAAAT TACCACAGAT TCAAAATACA GAACAATTAA
  M
  TCTGCTCAAT TTCTTCAGCT ATGGCCCCCT ACATGTTATC ATGTGAAGTC TATTATTTGC
  TGAACTCTGA CCTTCTGTTT CTAGGTAATC TGTTTCCTTC TTGTAGTTTT GCTTTTCCTA
  AAAAGTCCAA TAAAAGAATT CATACCATGT TTAGCCTTTT AGAAATTATA TTATTAAAAA
  TTCTGAGGCC TATTACCTTG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ
ss50470094	NES13703569	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	C	A	A	A
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	NOD/ShiLtJ
rs36947369					SNP	A	A	A	C	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50470094	NES13703569	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:71224913 () rs orientation: forward

Symbol	Name	Function Class
Rr393876	regulatory region 393876	1868 bp upstream