rs36948948 SNP Detail

Summary

• ID
  rs36948948
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:34465712 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTGGCTTT TTAAAATTAA
  CAGAAGGAAC ACTGAAAGCA TGGCTCAAGT ATCCTGAACC TGTCCAAGTT ACTGTGGTGT
  TACATAAGTA TAGGAGTATC TCTCGGGCAC AGAATTACCT ATACAGAGCC CTTGTCCCAA
  GAGTGACTAC AGTGACTCAG CTGGGACCCG CTCACAGCCA TCTGCAGTGC CGAGGTCCCT
  R
  ATAGCCTGTT ACAGAGGAGT TAAGGGCTAT TGCACCATGA TATGGGGGGT TGGCATCAAG
  CAGAGCCAAC AGTCCTCAGT CAGATCTGTG TGAGACTAAT TAAGCACTTG GTGGGTGGCT
  TCAAGAAGAT GTAATGGGCC AGGGTTGATT AGGGGCCTCT GTGAGAGGTT CAGACATGGG
  CTCATCCATG CTGTGTGGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51237520	NES14285853	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36948948					SNP	G	G	G	G	G	G	G	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51237520	NES14285853	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:34465712 () rs orientation: forward

Symbol	Name	Function Class
Gm37233	predicted gene, 37233	within coordinates