rs36952722 SNP Detail

Summary

• ID
  rs36952722
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:10269646 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGATCTCGAA TTTCTGTTCC
  TCCCGCTTCT ACCTCCCAGG TGCTGGGATG CCATGTTGGG GAATGAACCA AAGCAGTGAC
  ACATGCTAGG CAAGCATGCA AAAGTGAGCC ACATACCCTT CCACGTAGCA GGTTCTCACA
  CCAAGAGACT TGCCCTCTTA CCATTTCTTG CCTCCTCCCC GACAGTAACA CTGGGTCTAA
  K
  CACGGCTACA TCTTGTCTCC TACTGATGAA GATATGATTT ACCTTCTGTC TCCAAATTCC
  ACCAGAGTTC AGGTCTGAAT GCTCCAAGTC TTCACTGAAC TCTGTCCATC TGTCCATTGA
  GTGACAGACA CAACTCACTG ATATGTGTGT GTGCGTGCTT GTGTGTCACT AATTGTGTGT
  GTGTGTCTAG AGATATGCAT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	PWD/PhJ	WSB/EiJ
ss51070157	NES14373028	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	PWD/PhJ	WSB/EiJ
rs36952722					SNP	G	G	G	G	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51070157	NES14373028	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:10269646 () rs orientation: forward

Symbol	Name	Function Class
Chrm3	cholinergic receptor, muscarinic 3, cardiac	within coordinates
Rr281932	regulatory region 281932	355 bp proximal