rs36964648 SNP Detail

Summary

• ID
  rs36964648
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:26309439 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTCTTTAT TGTAGCTCTG
  AAGACTCTGT TACAGTCAAC AGAGCCCTTG ATGCTCTCCT GCACTTTATT TTTTTAAAGT
  TTTATTTGTT TGTGTAGTGT ATGTGTGTGT GTGTGTGTGT GTGTGTGTGT AAGAGGTAAG
  CATTGAAAGA ATAGTTAGTA AAACTAACTG TAGAGTTGCT AACGATAAGT TGTCCTAGGC
  Y
  ACTCTTGCCA GTATGACTGA GTCCAACAAG CTCCTGACCC ACTGAGCTGC CAGGAAACAT
  CCCAGTTTTG AGACAACCTC ACAGTGTTGT GCAGGTTGCC TTGGAGCCTC CGAATGGTCC
  AGTCTGACCC CAGAATCCTC ATTCCTGAGC TTTTCTTCAA ATGCTGGGAT TACAGGCCCA
  TACCAGTTCC TCCAGCTTTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
ss51506337	NES14638579	PERLEGEN	MM_PANEL2	f	SNP	T	C	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ
rs36964648					SNP	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51506337	NES14638579	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:26309439 () rs orientation: forward

Symbol	Name	Function Class
Dennd6a	DENN domain containing 6A	within coordinates
Gm62986	predicted gene, 62986	within coordinates
Rr298616	regulatory region 298616	1962 bp proximal
Tssr124682	transcription start site region 124682	1854 bp upstream