rs36974336 SNP Detail

Summary

• ID
  rs36974336
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:16404836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTTTTGGTA AAGAGTTCTT
  ATTTTCTTTT AGCTAAATTA ACTCTACAAT ATAGTGGATT AAAATTACTA GAATCAGAAA
  TGAAATTGGA GATACTGTTA CACATGCTTC AGAATTACAA GAATTCCATG GTTAATAAAA
  TGTATTCTGT GTGTGTATGT ATCATAGATT TAAGAGTACA ATGTCAAGAC CAAAAAAATA
  R
  TGTCTGCAGA TGGCATGAAC TTGTTTGTAA AGAATGCTAA ACATGTTTTC AGGACTGATG
  GTCAAACTCG GCACCGCCAC TGCCACCCCA CCTCCACCCC CAGCAAATGA GCGGACTCTA
  ATGAGTTGGG TTTTTCTGTG CTGATAGTAA CCATAAACAA AACAATTGGT TTTGTTCCAT
  GTATAGGGAA AGAGGCAGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51469877	NES13978634	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	G	G	G	A	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36974336					SNP	G	G	G	G	A	G	G	G	A	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51469877	NES13978634	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:16404836 () rs orientation: forward

Symbol	Name	Function Class
Ceacam15	CEA cell adhesion molecule 15	420 bp downstream
Rr642728	regulatory region 642728	1925 bp distal