rs36984609 SNP Detail

Summary

• ID
  rs36984609
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:68313728 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTCCTTACAG TGGACGGTTA
  ACACAGGTTC AAGCAACGCA GCAGCCATCA AATCAGTTCA AGGGGTGATA CTGAAATCCC
  TTGACAGCAC ACTTAGCTCT TCCTCACTCT GGCAGCTGCT GGAGAAAGTT AAGACTATAT
  ATTAGATACC CGGTGAGTTT GAGTCTATTT TTTGAACACA GATCTCCTAA TCCTGAATGC
  R
  TAGACCCCAG GAAGAAAGGA GAAAGGAAAC AGCAGTGAGG GCTTTGGTTG AATCCAGTCT
  CTGCTTATCT CCACCACGCA AGCAGCCTCA CCAGGGAGTA GGGCGGCTGC ATCTGAAAGG
  ATGCTCTAGC TGATGGCAGC TGTGAACCAG CCGGTGGCAC AAACCCATAG GGTCACCTCT
  TTGCTTTAAT ATGATCTGTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50975080	NES13920824	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36984609					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50975080	NES13920824	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:68313728 () rs orientation: forward

Symbol	Name	Function Class
Gm10723	predicted gene 10723	1388 bp upstream
Iqschfp	Iqcj and Schip1 fusion protein	within coordinates
Schip1	schwannomin interacting protein 1	within coordinates