rs36989764 SNP Detail

Summary

• ID
  rs36989764
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:10971471 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TACACACACA CATTCATATA
  AACACACACA CTCACATACA CACTCATACA CACTTACTCT CACATTCACA CACATACATG
  CTCATACATA CATAAATACA TGTAGACATG CATTCACACA TAACATGCAC ACACACACAC
  ACACACTCAC ACACTTCCTG CCTCTCAGGA GACTGAGCAG TGTTTGTCTT TATTTTACAG
  K
  CATGGTCTTG AATATCAAAG ACCAAAAGTC CTATGAGTAC ATTCAGTACA ACTTATTCAC
  AAGGAGCCTA AGGCCACGAG AGGCTCCTGC CCAGCCCCCA ACACCGTAGG TTCCGATTTC
  CTCCTCACTT TCTGGAAACT AACTCCTAAA TCTTATGATT TGAATTCACT CTTTGAAATT
  GTCCCATTTG GGGAGGTGAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51942745	NES14965280	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36989764					SNP	G	G	G	G	G	G	T	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51942745	NES14965280	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:10971471 () rs orientation: forward

Symbol	Name	Function Class
D8Ertd130e	DNA segment, Chr 8, ERATO Doi 130, expressed	1020 bp distal
Gm32594	predicted gene, 32594	387 bp upstream
Gm44955	predicted gene 44955	within coordinates
Rr659385	regulatory region 659385	within coordinates
Rr659386	regulatory region 659386	766 bp proximal