rs3699319 SNP Detail

Summary

• ID
  rs3699319
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19293222 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCCCAGTC AGCCTTCCAT
  CAGTCTCCCT GAGAAGAATG GATCTCAAAC AATTCAGACC CTCCAAAGAC TGCCACTAGG
  GGCACTGTTT GGGGTCGCTG CTCTTCCACA GGACCATGGC TTAAATTATA TACCCCTATG
  CTATAGAGGG TCCACAGACC AACTGTGACA CACCACCTGC CACCCCTGAT TCAAGCTGAA
  Y
  CATCCTCAGA GACCCATCTC TCAACTGGGC TCTCGACAAT CTTCTGGGCC CATCTAGCTT
  CCCATCCCCA ACAGCTCCCA GGCCACTGAC AACCCTGCTG TCCTCCTGGG CACCTACCCC
  TAGATGCTGA TGGTTTTGCA AATCTCTCTG TCCACGCTGG CCACCTTCAC AGTCCCTTCC
  CTAAGCTCAT TCCCAGCAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J
ss5075506	WI_WGS_7_14599086	WI	MOUSE	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J
rs3699319					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19293222 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18499	CpG island 18499	1840 bp proximal
Ppp1r37	protein phosphatase 1, regulatory subunit 37	within coordinates
Rr643185	regulatory region 643185	1812 bp distal
Rr643186	regulatory region 643186	473 bp distal
Rr643187	regulatory region 643187	33 bp distal