rs37000726 SNP Detail

Summary

• ID
  rs37000726
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:66120342 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGTCCTAAA GTATTCTCTG
  TCTTTCTGGG TGTCCTGTCC CACCAGAGGA ACCTTGCTTT TCAATGGCCT TCCAGCACCG
  TTTACTTTGA AGCTGAGGTT GGGGTTCATC AGGGTTAAGT CAAGTTCCTG AACCCACCGT
  GATTGGGAAA TGGAGCTGTG GCAATCCAGT GGCTACAGGG AAATGGGGAT TTACACCCAC
  S
  GAAGCTTGCC TTACCAGGAA CTTTCAGACT CCTTTCATTC ACATTACAAT GTGGTAAAAC
  TGCAACATTC CTGTCTGTGT TAGGTACGAA GAAACTGAGG GGGAGACTTA CACGATTGGC
  TAAACTCAGC AAAACTGGAA ATAGACCCTG GGTCTTTGGA CTCTAAATTC TGAATTTGAG
  TGGTTGTAGT TTATAGACTT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss50723201	NES14247809	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	C	G	G	G	C		G	C	G	G		G
ss322988309	CHEV_9_66060867	CHEVERUD	SCREENING_POP	f	SNP									C					C
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37000726					SNP	G	G	G	C	G	G	G	C	C	G	C	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50723201	NES14247809	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:66120342 () rs orientation: forward

Symbol	Name	Function Class
Dapk2	death-associated protein kinase 2	within coordinates
Rr401473	regulatory region 401473	630 bp downstream
Rr681677	regulatory region 681677	1339 bp distal
Rr681678	regulatory region 681678	673 bp distal
Rr681679	regulatory region 681679	within coordinates