rs37002605 SNP Detail

Summary

• ID
  rs37002605
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:71226651 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGGAACTCA TATGTCTACA
  CAAATAATGA TGATGAGATT AGTATTATTA GTAATAATAA ATAGTTTAAA AATTAAAAAA
  AAACTGTTTG GTCTAATCAA GTGTTTTTGA GCACAATGCT ATGTTATAAC AGAACTGACA
  ATGATCCTTT GTGAGAGCAT TGTTCTAGCT GATTTAAGGA GGGAACAAAT TGAGATGTTA
  R
  TGGCAGACCT CTCTGACAAT GGTGTGAACA TGGATGTAAA GACATGATGA GTAAATCAGT
  ACAAAAACAA AATTTCCACA TTGCAAATCA TTTAGCCTCA CTGGAAAATT AAATAGGAGG
  CAAGAATTGT AGGGATGCCA GGGGGAGGTT GGTACCAACC TACCCAGAAC CTTGTAAGTC
  ATACTGAAGA TGTTAAATCC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss50470068	NES13703518	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	G	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs37002605					SNP	A	A	A	G	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50470068	NES13703518	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:71226651 () rs orientation: forward

Symbol	Name	Function Class
Rr393876	regulatory region 393876	130 bp upstream