rs3700279 SNP Detail

Summary

• ID
  rs3700279
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:17696145 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCAC AGTTCAATCA TTAACCTACC
  R
  TAGAATATTT TGATCAATGC AGGCT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss5076473	WI_WGS_9_17769989	WI	MOUSE	f	SNP	G			A
ss46308480	mCV24469738	ABI	CRAMUS_MOUSE	f	SNP	G	G	A	A	A
ss136214432	ENSMUSSNP1795564	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	A
ss322872976	CHEV_9_17589293	CHEVERUD	SCREENING_POP	f	SNP						G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs3700279					SNP	G	G	A	A	A	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:17696145 () rs orientation: forward

Symbol	Name	Function Class
Gm48849	predicted gene, 48849	459 bp downstream