rs37003266 SNP Detail

Summary

• ID
  rs37003266
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:128002056 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAGCCTGCT TTCTTATAAA
  ACCCAGGACC CCAGCCCAGG GATGGCACTG CCCACCAAGG CCAAAGGCAT GCACCACCAA
  CCCTGGCTTA AGAAGTTGAA TGATCAAGGA AGCACAAGTT TGGACTAAAA TGGAAGAGAG
  GGGAAACGGG GAGGGCAGGG GATGTAGCTC TAAAGAGCTC TGGCCTGGTA AGCCCTCACA
  Y
  TAAACCGTGG GAGAGAAGAG GTCTCTGCCC TCTGTTGCAA ACAGATCATT TCTCACTCAA
  GAGGAAGAAG ACAGGAGAGC AGGTAAGAGA GCCAAGGGTT ATGACTGTTG ACCTAGGAGC
  CAGGAGAGAA GAGTGAAGAC TCCTCCCACA GAGCAGAAGT AGAAGTCTAT GTGGACTGAG
  ATACATGTGG GGCAGGAAAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
ss50948849	NES14144025	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T		C	T	T	C
ss323532016	CHEV_10_127603243	CHEVERUD	SCREENING_POP	f	SNP											T					C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	SM/J
rs37003266					SNP	T	T	T	T	T	T	C	T	T	T	T	C	T	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50948849	NES14144025	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:128002056 () rs orientation: forward

Symbol	Name	Function Class
Rbms2	RNA binding motif, single stranded interacting protein 2	within coordinates
Rr213658	regulatory region 213658	745 bp proximal
Rr226545	regulatory region 226545	within coordinates