rs37006239 SNP Detail

Summary

• ID
  rs37006239
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:97004256 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTGCACTC TCCACCCTTT
  CAGTTCCCAT AATGAATTTA GAACCTGCAG CTAAAGCTGT GCTCTGACCA TGGAGAAGGT
  TCACATTCCA CAGTAATGGA ACCCCAACTG CAGTTCCATG TAAAAGAAAA TTACAGAAAA
  CTTTAAGAAA CAAACCAAGT TTTCACACTT ACACATGTGT ATGATGCATA TTTGTTTCAG
  R
  GATCCAAGGT CAAGAGTAAG TTCTTACTCA TGGATCTAAA TCATTTGAAA TATGTTGGTG
  AGAGGAGGAA TTTGTTGAGT AGTAGCCCAC CTGACATACT CAAGTCATAT TAAAGAAATT
  TTCCATAAGT TACTGAGATC AGCTGCCTCA GGACATTTCC CTGTTGAATT AGCTAAAACT
  GAAGTGAGCT ATCTATGAGA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50907052	NES14162648	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37006239					SNP	G	G	G	G	G	G	G	G	G	A	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50907052	NES14162648	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:97004256 () rs orientation: forward

Symbol	Name	Function Class
D10Mit142	DNA segment, Chr 10, Massachusetts Institute of Technology 142	884 bp distal
D10Mit142.2	DNA segment, Chr 10, Massachusetts Institute of Technology 142.2	1003 bp distal