rs3701069 SNP Detail

Summary

• ID
  rs3701069
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:19293495 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGCTCCCAGG CCACTGACAA
  CCCTGCTGTC CTCCTGGGCA CCTACCCCTA GATGCTGATG GTTTTGCAAA TCTCTCTGTC
  CACGCTGGCC ACCTTCACAG TCCCTTCCCT AAGCTCATTC CCAGCAAGAA GTCATGGCTG
  GCTCTCTACT CCCTCCACCA AAAGGTGAAC AGCAAGTAGT CTCGGCTGTC ACTCTGGAAG
  R
  CTAGAAGAAT GACCGTCTCC CTGGCCTAGG AGTCACCATT AACTCTACCT GTCACCCTTA
  ACAGCAGCAA TCCAATTAGC TGCTTTCCAG GACAGGAATT TACAAGAGCC TCTTGTTTAA
  AGCTTACAAC TCAGAAATTA GCACCTCCAT TTGCAGACAG AGAAACCGGA GGCATGAGGG
  GAGAAACCAG CTTTCTCAAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	C3H/HeJ	C57BL/6J
ss5077269	WI_WGS_7_14599359	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	C3H/HeJ	C57BL/6J
rs3701069					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:19293495 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18499	CpG island 18499	1567 bp proximal
Ppp1r37	protein phosphatase 1, regulatory subunit 37	within coordinates
Rr643186	regulatory region 643186	746 bp distal
Rr643187	regulatory region 643187	306 bp distal