rs37012817 SNP Detail

Summary

• ID
  rs37012817
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:35747799 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTCATCTT TTAAAACTAT
  TAAATCATGC CATTTTTAGG AAAATAGGTG AAAATGGAGG CTATTATATT CATTGAATTA
  AACAAGTCTC ATAGTGTGAC TCTCAGTTTA AGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
  TGTGATGAAG TGCAAGGAAA CCATGAATGG AGATAAATTG ATTATTTGGT TGGGAGTAAT
  M
  TTAAGCATGT AAAATGCATG CAAAAGTGGA GACTCCAATA GACTGAGTAT GCTTATACTT
  ACTGGAAAAA ATCCATTTAT AGAAAAAGCT TAGTTGGAAA ATATTGTGTC ATGTCCATAC
  CCCAAATGTA ACATATTCTA AGACCCCTAA ATAAATAATG CCTGTAAGAC ATGAAAGTTA
  TTGAATCTTG AGTCTGGGAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
ss50672081	NES14008989	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ
rs37012817					SNP	A	A	A	A	A	A	C	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50672081	NES14008989	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:35747799 () rs orientation: forward

Symbol	Name	Function Class
Gm36974	predicted gene, 36974	46 bp downstream
Pate5	prostate and testis expressed 5	1826 bp downstream