rs37014840 SNP Detail

Summary

• ID
  rs37014840
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:28391943 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGGTCCTG AGTTCAAATC
  CCAGCAACCA CATGGTGGCT CACAACCATC CAGAATGAGA TCCGATGCCC TCTTATGGTG
  TGTCTGAAGA CAGCTACAGT ATACTTATGT ATAATAATAA ATCTTTGGGT TGGAGCAAGC
  AGAGACTCAG CAGGTCGATC AGATCGAGCA GAACCTACCA GAGCAAGCAA GGCTGACCGG
  R
  GCAAGCAGAA GTTCTAAAAG TTCAGTTCCG GACAACCACA TAAAGGCTCA CAACCATCTG
  TACAGCTACA GTGTACTCAC ATACATAAGA TAAATCTCTT TTTAAAATGT GCTAAGTTGC
  CGAAGTTCGA AACTGTAAGC TTCAGCTGAT GCTTTCGATT AGCGGGGTCA TTGTTGTCCT
  CTAGAGCCTG CTTTTTCTTG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	MOLF/EiJ	WSB/EiJ
ss51886711	NES14910678	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	MOLF/EiJ	WSB/EiJ
rs37014840					SNP	G	G	G	G	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51886711	NES14910678	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:28391943 () rs orientation: forward

Symbol	Name	Function Class
Cpgi18715	CpG island 18715	541 bp proximal
Fbxo27	F-box protein 27	331 bp upstream
Tssr65494	transcription start site region 65494	298 bp upstream
Tssr65495	transcription start site region 65495	337 bp upstream
Tssr65496	transcription start site region 65496	485 bp upstream
Tssr65497	transcription start site region 65497	494 bp upstream
Tssr65498	transcription start site region 65498	514 bp upstream
Tssr65499	transcription start site region 65499	1479 bp upstream