rs37021217 SNP Detail

Summary

• ID
  rs37021217
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr15:79510916 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATGGCCATC CTTGGCTCCA
  TGCCACAAAT ACTCACTGTC TATCTACTCT GTACCATGTT GATGCTGGAT GCTGTAAACA
  GATTATCTTC AAGGACCTTC TAGTTTACTC AGGAAAAAAG GACACGTGAA TACTGTCACA
  CTAACTCAGG TACCATGGAT AAAGTATCTC CAGGAACCTG CATGTCATCG TAAAATAGGG
  R
  AAGACCCAAA GGTTTTAAGA TGCCAGCAGC AGCAGACTGG GTACTATGGT GTCTCTGGGA
  CAAAGAAACA AACATCAGTG CAGCTTCCAC ACACACAGTG GCTTTCCTGT AGGAGGTGAG
  CAGAGAATGG CTTGAAGACA AACAAAAAAC GCAACAGGTC ATCTGAAGCC AGATCACTAG
  AGTGCCCACG GAGCTGTGCG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51725097	NES14567299	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	G	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37021217					SNP	A	A	A	A	A	A	A	A	G	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51725097	NES14567299	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:79510916 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Fam227a	family with sequence similarity 227, member A			Intron
				Noncoding-Transcript-Variant
Rr390973	regulatory region 390973			877 bp upstream
Rr505687	regulatory region 505687			1428 bp proximal
Rr505688	regulatory region 505688			1622 bp proximal