rs37024450 SNP Detail

Summary

• ID
  rs37024450
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:165155567 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CAAATACACT AAAAGCACCA ACAGAGAGGG CCTGTGCTTG
  AGATGAGTGT GGCAGACTGT CAGATCTGCT CTGCCTTTCA TCGGTCAGGC AGCTCTGCAG
  K
  GTCTGGAAGC CGCTTCCAGC TGTGGTCCAG AGCTAGAGCT CAAGGCTAGC ACTGAAGGTG
  ATGGATGAGA TACAACATGG ACCTACAGTT CGGCCTTGG                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss51401430	NES14455690	PERLEGEN	MM_PANEL2	f	SNP	G	G	T	G	G	T	G	G
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs37024450					SNP	G	G	T	G	G	T	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51401430	NES14455690	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:165155567 () rs orientation: forward

Symbol	Name	Function Class
Dcaf6	DDB1 and CUL4 associated factor 6	1502 bp downstream
Gpr161	G protein-coupled receptor 161	1253 bp downstream
Rr20301	regulatory region 20301	34 bp proximal
Rr25485	regulatory region 25485	243 bp distal
Rr25486	regulatory region 25486	1564 bp proximal
Tssr14767	transcription start site region 14767	1814 bp downstream