rs37031106 SNP Detail

Summary

• ID
  rs37031106
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:80597435 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCCTC AGCATGCCCG CCATCAAAAA
  M
  CTCTCTGTGG AGCCAACTGA GGTGT                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
ss50521926	NES13678033	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	A	A	A		C	A		C
ss147593144	ENSMUSSNP6802609	ENSEMBL	ENSEMBL_Sanger	f	SNP		C
ss325709634	CHEV_18_80750959	CHEVERUD	SCREENING_POP	f	SNP									C			A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	KK/HlJ	LG/J	NOD/ShiLtJ	NZW/LacJ	SM/J	WSB/EiJ
rs37031106					SNP	C	C	C	C	C	A	A	A	C	C	A	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50521926	NES13678033	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:80597435 () rs orientation: forward

Symbol	Name	Function Class
Cpgi10304	CpG island 10304	673 bp proximal
Gm54039	predicted gene, 54039	within coordinates
Rr541547	regulatory region 541547	28 bp proximal
Tssr152111	transcription start site region 152111	970 bp upstream
Tssr152112	transcription start site region 152112	1007 bp upstream
Tssr154031	transcription start site region 154031	560 bp downstream