rs37033217 SNP Detail

Summary

• ID
  rs37033217
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:36052710 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGTC GCTTGACATT GGGGTTACTC
  R
  ATCTCTTTTT CATTAATACC CTCCC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BTBR T<+> Itpr3/J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss51452928	NES14433117	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	G	G
SNP Consensus Information
SNP					Consensus Type	AKR/J	BTBR T<+> Itpr3/J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs37033217					SNP	A	A	A	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51452928	NES14433117	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:36052710 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cpgi13078	CpG island 13078			1676 bp proximal
Mccc1	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha)			Intron
				Noncoding-Transcript-Variant
Mccc1os	methylcrotonoyl-Coenzyme A carboxylase 1 (alpha), opposite strand			1352 bp upstream
Rr397641	regulatory region 397641			1993 bp upstream
Rr575296	regulatory region 575296			1182 bp proximal
Rr575297	regulatory region 575297			1384 bp proximal
Tssr28858	transcription start site region 28858			1856 bp upstream