rs37034891 SNP Detail

Summary

• ID
  rs37034891
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:187993922 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGACAGAAAT GACAACTTTG
  GATGTATGTG CATACAGACA CCACACATGA GCTGGCAGTC AGGTGACTAC AATTTGGCAG
  CCCCATTAGT CCCTGGTTCC TTCTCTGGCT GGTTTAGAGT CTGTTTTCCA AGCCCAGTGT
  TTAGAAGTCC ACGGTGTATC TTGCCTTAAG TAATCAAACA CAGTTAGAGC AGGATGTCCT
  R
  AGGTGAACAA AGCCAAAGAG AAAATTCCAT CAATTGGCCA GCCTCATGCT GGCTCCTTCC
  TCCCAAAGAG GGAACATGCA GAACTGCAGA ACGACCCATA TAGTTGCTGT CTTATAGAAT
  CAGGCCTTTG TGATTAAAGC ATCGCATGGA GTAAGATTCA TAAAAGCAGG GAAAGGGAGG
  GGCCTGGCAG GGTATTACAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
ss51416344	NES14451672	PERLEGEN	MM_PANEL2	f	SNP	G	A	G	G	G	G	G		G	G	G		G
ss320187305	CHEV_1_190085604	CHEVERUD	SCREENING_POP	f	SNP								A				G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	KK/HlJ	LG/J	MOLF/EiJ	NZW/LacJ	PWD/PhJ	SM/J	WSB/EiJ
rs37034891					SNP	G	A	G	G	G	G	G	A	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51416344	NES14451672	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:187993922 () rs orientation: forward

Symbol	Name	Function Class
Cpgi1191	CpG island 1191	1492 bp proximal
Rr425684	regulatory region 425684	776 bp distal
Rr425685	regulatory region 425685	1014 bp distal
Tssr368	transcription start site region 368	1174 bp upstream
Tssr10680	transcription start site region 10680	256 bp upstream
Tssr10681	transcription start site region 10681	292 bp upstream
Ush2a	usherin	1113 bp upstream