CACAAGAAAA AGACCAGGAT CTAAGGAGGG AGATCCAAGT TAGTAGGGAC AGGAATGGAA AACAGTCTCC TAGGCAAAGT CATAACTCAG GGAAACAATT R TCTGAGTGTT GAGTGAGAGC CCCACACAAG AAGACACAAC TTCCTGTCTA GTAGATGGGC TGTGGAGTGG TGGATTTCTT CAGAAATACT TGAGAGACTC R = A/G Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51882336 | NES14899006 | PERLEGEN | MM_PANEL2 | f | SNP | G | A | A | G | G | A | A | A | G | G | A |
SNP Consensus Information | ||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
NZW/LacJ |
PWD/PhJ |
WSB/EiJ |
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rs37035937 | SNP | G | A | A | G | G | A | A | A | G | G | A |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51882336 | NES14899006 | PERLEGEN | MM_PANEL | f | SNP | A/G |
Location: Chr7:18302007 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Psg27 | pregnancy-specific beta-1-glycoprotein 27 | 777 bp upstream | ||||||
Tssr2095 | transcription start site region 2095 | 521 bp upstream | ||||||
Tssr70834 | transcription start site region 70834 | 885 bp upstream | ||||||
Tssr70835 | transcription start site region 70835 | 784 bp upstream | ||||||
Tssr70836 | transcription start site region 70836 | 737 bp upstream | ||||||
Tssr70837 | transcription start site region 70837 | 687 bp upstream | ||||||
Tssr70838 | transcription start site region 70838 | 559 bp upstream |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 12/17/2024 MGI 6.24 |
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