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rs37036420 SNP Detail
Summary
  • ID
    rs37036420
  • Variation Type
    SNP
  • Alleles
    C/G
Genome Location and Flanking Sequence
  • Location
    Chr10:127755056 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                                GTTTAAGTGG AGAGAAAACC
    AGAGAGACAG AGAGAGAGAG ACAGAGACAG AGACAGAGAC AGAGACAGAG AGAGAGACTG
    AAACTCACAG GCCAGGATTA GCACCTTGTC TTCTGTGCAA TAGGGAACCA GTTTAAGTGG
    AGAGAGAACC GTTGTCCTTA CACACACACT ACAAATTACC TTGTCCATCC TAAAAGTCGT
    S
    TGATACCTGG ATCAGCATCC AGCATGTTAG TCAAGCAATT AGAAAAGGAA GAAGACTGTG
    AGCAGTGGTG GTGGCCCCAG AGTTCACAGG AGGCAGGTGT GAAAGGCAAT TAGGAAGGAT
    TATGTGACTA AACACTTCGA ACCACTTCTG CAGAGCAAGC CACACTCTTG CCTTTCAAAG
    GATACCTGAA CATTACAGTC                                            
    
    S = C/G
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
ss50945551 NES14147462 PERLEGEN MM_PANEL2 f SNP C C C C C C G C C C C C C C C
SNP Consensus Information
SNP Consensus Type
129S1/SvImJ
A/J
AKR/J
BALB/cByJ
BTBR T<+> Itpr3/J
C3H/HeJ
CAST/EiJ
DBA/2J
FVB/NJ
KK/HlJ
MOLF/EiJ
NOD/ShiLtJ
NZW/LacJ
PWD/PhJ
WSB/EiJ
rs37036420 SNP C C C C C C G C C C C C C C C
Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation
Type
Alleles
ss50945551 NES14147462 PERLEGEN MM_PANEL f SNP C/G
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr10:127755056 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Gm15905 predicted gene 15905 1882 bp upstream
Gm40804 predicted gene, 40804 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory