rs37041634 SNP Detail

Summary

• ID
  rs37041634
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:8061467 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTCAACATTG AAGTATCTCC
  ATTTGCTGTA GAGACACTGG CTTCCAGCCA TGTGATCCCC ACAGCAATAA GCACCCCAAG
  TGTCACAATC CCTGGTCCTA ACATCATGGT GCCTTCATAC AAGTTAGTGC TGCCACCCCT
  GGAGTTGCCA GTTTTCCATG GTCCTGGGAA TCTATTCAAG TTTTTCCTCC CAGATTTCAA
  R
  GGATTCAACA CTATTGACAA TATTTATATT CCAGCCATGG GCAACTTTAC CTATGACTTT
  TCTTTTAAAT CAAGTGTCAT CACACTGAAT ACCAATGCTG GACTTTATAA CCAATCAGAT
  ATCGTTGCCC ATTTCCTTTC TTCCTCTTCA TTTGTCACTG ACGCCCTGCA GTACAAATTA
  GAGGGAACAT CACGTCTGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50958138	NES14429025	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37041634					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50958138	NES14429025	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:8061467 () rs orientation: forward

Symbol	Name	Function Class
Apob	apolipoprotein B	within coordinates
Tssr112660	transcription start site region 112660	1882 bp downstream
Tssr112661	transcription start site region 112661	1647 bp downstream
Tssr112662	transcription start site region 112662	1406 bp downstream
Tssr112663	transcription start site region 112663	1165 bp downstream
Tssr112664	transcription start site region 112664	1141 bp downstream
Tssr112665	transcription start site region 112665	986 bp downstream
Tssr112666	transcription start site region 112666	966 bp downstream
Tssr112667	transcription start site region 112667	917 bp downstream
Tssr112668	transcription start site region 112668	781 bp downstream
Tssr112669	transcription start site region 112669	694 bp downstream
Tssr112670	transcription start site region 112670	638 bp downstream
Tssr112671	transcription start site region 112671	535 bp downstream
Tssr112672	transcription start site region 112672	35 bp upstream
Tssr112673	transcription start site region 112673	78 bp upstream
Tssr112674	transcription start site region 112674	179 bp upstream
Tssr112675	transcription start site region 112675	206 bp upstream
Tssr112676	transcription start site region 112676	309 bp upstream
Tssr112677	transcription start site region 112677	459 bp upstream
Tssr112678	transcription start site region 112678	583 bp upstream
Tssr112679	transcription start site region 112679	608 bp upstream
Tssr112680	transcription start site region 112680	627 bp upstream
Tssr112681	transcription start site region 112681	674 bp upstream
Tssr112682	transcription start site region 112682	687 bp upstream
Tssr112683	transcription start site region 112683	724 bp upstream
Tssr112684	transcription start site region 112684	768 bp upstream
Tssr112685	transcription start site region 112685	816 bp upstream
Tssr112686	transcription start site region 112686	864 bp upstream
Tssr112687	transcription start site region 112687	944 bp upstream
Tssr112688	transcription start site region 112688	1045 bp upstream
Tssr112689	transcription start site region 112689	1087 bp upstream
Tssr112690	transcription start site region 112690	1112 bp upstream
Tssr112691	transcription start site region 112691	1163 bp upstream
Tssr112692	transcription start site region 112692	1199 bp upstream
Tssr112693	transcription start site region 112693	1218 bp upstream
Tssr112694	transcription start site region 112694	1356 bp upstream
Tssr112695	transcription start site region 112695	1575 bp upstream