rs37041775 SNP Detail

Summary

• ID
  rs37041775
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:45502202 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCGTTTTCA AAGACATTAT
  GGGATGCATA GAGAGCATTA TGGGATGCAT AGAGAGCATT CTGTTTAGAA AAGTGGCCAC
  AGTTCTACTG TGACTGACTG CTCCTCTTAC CGTGATGGTG ACATACCTGC TGGGTCACAC
  TTGACCCACG TTGTCTTCAA TAATCTGTGA GATTTTCGTC TCATTTCTTA TAGAAAACCA
  R
  TCTGAACCTT AGTCAGGCTG AGCATCCCAT GGTCCTGAGT GCTTTCTATC CATTTCCTTG
  GACTTGGGGC CAGAGGTCTG TGTGTAATGT GGTCACTGGG AGAGAGAGTA CAGTTGCAGA
  GTTGATGGGA AGAGGCCATG CCATGAAGTA GTTAATTCGG GAGCTCACTA GAGAAAGGGT
  TAACAGTATA AATAGAAAAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51951770	NES14977138	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37041775					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51951770	NES14977138	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:45502202 () rs orientation: forward

Symbol	Name	Function Class
Cpgi20295	CpG island 20295	1898 bp proximal
Fat1	FAT atypical cadherin 1	within coordinates
Tssr77124	transcription start site region 77124	1755 bp upstream