rs37042305 SNP Detail

Summary

• ID
  rs37042305
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:72500223 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGATCTCTCC TGTCCATTCT
  AGGGATGGAG GGTTTTAGTA TGATTTCAGG GTAGGTACTT CTACAGGGAT ATTCTTTGAG
  TGTGCAGAGT AAATCGAATA TAAAGAATTT ACCACAATGT TTGTTCTAAA CATTTAACAA
  TTTAGAAATT AAAAAAATAT ATAAATAGGC AAGTAAGTTA GGAAATATTC ATACAAAAGT
  M
  ATTTTGATCT AAACAAAAAC CTTATTTTGT AATATCTTCA CTACCTAACA TGCTTTAGAA
  TCCAAGCCAG CAGTTTAGCC AAACAGGCCA GTATTTTCAG TCTGAAACAG ATAGTAAAAA
  CTGGCTCACA GTCACAAATA CACAATTTCT ATATAGATTA CTGCGTATCT ACTGTATGTC
  CTAAGTTCAG TTTGATCCGC                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50741796	NES14239862	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37042305					SNP	C	C	C	C	C	C	A	C	C	C	A	C	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50741796	NES14239862	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:72500223 () rs orientation: forward

Symbol	Name	Function Class
Gm37105	predicted gene, 37105	1982 bp upstream
Rfx7	regulatory factor X, 7	within coordinates
Rr682776	regulatory region 682776	1548 bp proximal
Rr682777	regulatory region 682777	1921 bp proximal