rs37046477 SNP Detail

Summary

• ID
  rs37046477
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  132
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr13:36395211 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                      T CTATCTAAAT CCGCCACCAT TGCCAGTCAC CTGCTCCTCT
  GCTTCTGCTC ATTAGTGAAG TAGAAATTTT CCCCTCATAG GGTAAAACAG AGGACCTTAA
  K
  CCCTGGTTCA ATCCTTAGCA CCACCAAGAA CAGAAAGAAA GAGAGCCTGA AGGCTGGAGA
  GGTGGCTCAG TGGTTAAGAG TGGGAACTGT TCGTGCAGAG G                    
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51094121	NES14363027	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	T		G	G	G	G
ss148872092	ENSMUSSNP4780231	ENSEMBL	ENSEMBL_Sanger	f	SNP		G									T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37046477					SNP	G	G	G	G	G	G	G	G	G	T	T	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51094121	NES14363027	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr13:36395211 () rs orientation: forward

Symbol	Name	Function Class
Fars2	phenylalanine-tRNA synthetase 2, mitochondrial	within coordinates
Gm40912	predicted gene, 40912	within coordinates
Rr279014	regulatory region 279014	1672 bp distal
Rr286029	regulatory region 286029	within coordinates