rs37046987 SNP Detail

Summary

• ID
  rs37046987
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:89019124 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAGTCAGAT CTCATTATGG
  ATGGTTCTGA GCCACCATGT GGTTGCTGGG ATTTGAACTC CGGACCTTCA GAAGAGCAGT
  CGGGTGCTCT TACCCACTGA GCCATCTCAC CAGCCCGTGG AATACTATTT AGCCATGCAG
  AAGACTGAAG AAAGTGTTTC TGTAATGATT GATCTTTAAG ACACTGTGCT GAGTGGAAAG
  Y
  TGGTCAGGAG AGATCAGGAA TCATGTGACT CTGTTGGTAG GGCAGCAGAT GCACAGAGCG
  GGACAGCGGG TTAGTGACTT CTGGGAGCTG AAGGAATGGC ACGAGGAACG ACTTAGAGAT
  ACCAAGTTTC CTTGGGTGTG ATTAAAAGAA GTGAACATTC TAGAAACTGT TGGCATGTCC
  ATTTTAAAGT GGCAAGTGTT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51760699	NES14794702	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37046987					SNP	C	C	C	C	C	C	T	C	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51760699	NES14794702	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:89019124 () rs orientation: forward

Symbol	Name	Function Class
D6Mit248	DNA segment, Chr 6, Massachusetts Institute of Technology 248	1526 bp proximal
Gm66902	predicted gene, 66902	within coordinates
Rr634071	regulatory region 634071	346 bp proximal