rs37047431 SNP Detail

Summary

• ID
  rs37047431
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:60986455 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTCTCTTTA CAGCTATAAA
  ACCCAAACTA AGACAATAAT GTTTTAGGAG AGAGTCCCCT TAATGTTTGT TAAGTTGGCC
  TACTGGAGCC TAATCTAATT AGTATGTTAT CCTCTACATA CGGACACTGA CAGTTCTTTA
  CCCCTTTCTC TGCTTCTGAG AGTTACCCCT CGCTTTCAGA GCTGTCCCTG GTCATTCCCA
  K
  TTCCTCTTTC TTGTTTTTCC CAGAATGCCA TCAGTCTGCC TGGTGCCTTG ACATCCACTT
  GCTGCTTATG TCTTATTGGA GCTGTAAGCA CCGTGATCTC CTTCAGTGCA GAGATGGGCC
  TAGGGGGCGG GGGTAGGGGG AGGGATGGGG GTGGGAGTGA GGGGCAGGCT GGTGCTTACG
  CACAGGCTTC AGGATGCTGT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss52025179	NES15041790	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37047431					SNP	T	T	T	T	T	T	T	T	T	T	G	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss52025179	NES15041790	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:60986455 () rs orientation: forward

Symbol	Name	Function Class
Rr196204	regulatory region 196204	1655 bp distal
Rr209952	regulatory region 209952	1617 bp distal
Rr209953	regulatory region 209953	1947 bp proximal