rs37051083 SNP Detail

Summary

• ID
  rs37051083
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:58670676 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTCTCTGG TCAGACATCT
  CTGGAGGGAT TGAACGGCAG GAGACAAGGA GGGACTCTGA GACAAGTCTG ATCTTTTCTA
  TGGTCCTGCT TCTCTTACTG TGTTTCCCAT AGAACCTCTG CCGCCCCATA ATCTATTTGA
  TCTTCCAAAA GCACAAAACA AAGCCATCAT ATTCCAATAA GCCCAGGGCA GAGTTCCTAT
  W
  TCATAGTCAG CCTTCCTGAT CACTTCTCAT TCTGGCTTTC ACTTAGGACT CCAGTCTTAC
  CACCCAGGAC ATTCAGTCTG AAACTCCACA CTCTAGACTT ATCCCCAGGG ACAGACTATT
  TATTGTCTTT CACAGTTTTT TTTTTCTTTT ATACTCATAC CTGATATGAA TACTATAAAA
  CTATAGACAC AAAACCAGGA                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50903967	NES13492605	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37051083					SNP	T	T	T	T	T	T	T	T	T	T	T	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50903967	NES13492605	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:58670676 () rs orientation: forward

Symbol	Name	Function Class
Pnlip	pancreatic lipase	445 bp downstream
Tssr157285	transcription start site region 157285	1482 bp downstream
Tssr157286	transcription start site region 157286	1435 bp downstream
Tssr157287	transcription start site region 157287	1407 bp downstream
Tssr157288	transcription start site region 157288	487 bp downstream
Tssr159962	transcription start site region 159962	458 bp upstream