rs37051959 SNP Detail

Summary

• ID
  rs37051959
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr8:121315715 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGTTAATGGC CAGCCACAGG
  GGCACGTCCA CGGGTAAGCC GGGGTTGAAG GGCCCCAGGT CCCCCTGCAA GGACAACGCA
  GACCCCAGGT GGAAAGGAGC GGTGACCCGA GCATGATCCC AGGCCGCCGC CCCGTACCGC
  CCTGGCTCAC CCCGATCAGG TAGATCTTGT CCAGACTGAA GTTCGGGATG ATAGTCACCA
  R
  CTCCTTTTCG GCCAAAAACT CCACCTCGGC CGCATCCATG TTGAAGAGTA GGCGGCCCAG
  GCCCGTTACC GCCCCTCCGC GACTCAGAGG CAGCGCCTCA GGCACTTCTT TCCCGCCACC
  GCGCGGGGCC CGCCCCTCGA ACGGAAGACG TCCTGCGGCG GCCCTATAGA GACGTTGCTC
  TCTTCGCAGC CTCCAAGTCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss51983399	NES14995665	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	G	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs37051959					SNP	A	A	A	A	A	A	A	A	A	A	G	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51983399	NES14995665	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:121315715 () rs orientation: forward

Symbol	Name	Function Class
Cpgi21156	CpG island 21156	within coordinates
Gins2	GINS complex subunit 2	within coordinates
Gm10614	predicted gene 10614	524 bp upstream
Rr401181	regulatory region 401181	within coordinates
Rr671590	regulatory region 671590	318 bp proximal
Rr671591	regulatory region 671591	540 bp proximal
Rr671592	regulatory region 671592	550 bp proximal
Tssr83202	transcription start site region 83202	43 bp downstream
Tssr83203	transcription start site region 83203	83 bp downstream
Tssr83204	transcription start site region 83204	95 bp downstream
Tssr83205	transcription start site region 83205	105 bp downstream